STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG15527.1KEGG: drm:Dred_1048 hypothetical protein. (70 aa)    
Predicted Functional Partners:
AEG15526.1
Peptidase U62 modulator of DNA gyrase; KEGG: pth:PTH_1159 Zn-dependent protease; manually curated; PFAM: Peptidase U62, modulator of DNA gyrase.
       0.544
AEG15524.1
PFAM: Peptidase M24, structural domain; Creatinase; KEGG: pth:PTH_1161 Xaa-Pro aminopeptidase.
       0.403
AEG15525.1
KEGG: pth:PTH_1160 3-dehydroquinate dehydratase II; manually curated; TIGRFAM: Dehydroquinase, class II; PFAM: Dehydroquinase, class II; HAMAP: Dehydroquinase, class II.
       0.403
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.