STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG15936.1PFAM: TRAG protein; KEGG: dae:Dtox_1405 TraG family protein. (688 aa)    
Predicted Functional Partners:
AEG14494.1
PFAM: TRAG protein; KEGG: dau:Daud_0815 TraG family protein.
  
  
 
0.927
AEG15181.1
PFAM: TRAG protein; KEGG: pth:PTH_2488 type IV secretory pathway, VirD4 components.
  
  
 
0.913
AEG14425.1
KEGG: drm:Dred_0931 hypothetical protein.
 
  
 0.796
AEG15950.1
KEGG: mta:Moth_0357 hypothetical protein.
 
    0.747
AEG15158.1
KEGG: pth:PTH_2456 hypothetical protein.
 
    0.735
AEG16809.1
CBS domain containing protein; KEGG: dae:Dtox_0963 putative signal transduction protein with CBS domains; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core.
  
     0.719
AEG14781.1
KEGG: pth:PTH_1320 suppresse phage shock protein A.
 
     0.710
AEG16503.1
KEGG: pth:PTH_2600 hypothetical protein.
  
     0.709
AEG14507.1
KEGG: tte:TTE2018 DNA primase.
 
     0.699
AEG14341.1
KEGG: adg:Adeg_0706 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease.
   
 
 0.677
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.