STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG15977.1PFAM: Type II secretion system protein E; Fimbrial assembly; KEGG: mta:Moth_0335 type II secretion system protein E. (701 aa)    
Predicted Functional Partners:
AEG16218.1
PFAM: Type II secretion system F domain; KEGG: drm:Dred_2118 type II secretion system protein.
 
  
 0.996
AEG16221.1
KEGG: pth:PTH_1450 response regulator; PFAM: Signal transduction response regulator, receiver region; Cobyrinic acid a,c-diamide synthase; SMART: Signal transduction response regulator, receiver region.
  
 0.969
AEG16222.1
KEGG: pth:PTH_1449 flp pilus assembly protein CpaB; TIGRFAM: Pilus assembly, Flp-type CpaB; PFAM: SAF domain.
 
  
 0.955
AEG16224.1
TadE family protein; PFAM: TadE-like; KEGG: aar:Acear_0231 TadE family protein.
 
  
 0.939
AEG16223.1
PFAM: Protein of unknown function DUF2134, membrane; KEGG: pth:PTH_1448 flp pilus assembly protein TadD.
 
  
 0.918
AEG15978.1
PFAM: SAF domain; KEGG: mta:Moth_0334 Flp pilus assembly CpaB.
  
  
 0.909
AEG16225.1
PFAM: Peptidase A24A, prepilin type IV; KEGG: drm:Dred_2111 peptidase A24A, prepilin type IV.
 
  
 0.908
AEG16219.1
PFAM: Type II secretion system F domain; KEGG: pth:PTH_1452 flp pilus assembly protein TadC.
 
  
 0.887
AEG15973.1
KEGG: mta:Moth_0340 hypothetical protein.
  
  
 0.881
AEG14454.1
PFAM: SAF domain; KEGG: tjr:TherJR_2811 Flp pilus assembly protein CpaB.
 
  
 0.879
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.