STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG16001.1KEGG: mta:Moth_0308 hypothetical protein. (608 aa)    
Predicted Functional Partners:
AEG15998.1
PFAM: Peptidase M23; Lytic transglycosylase-like, catalytic; KEGG: mta:Moth_0315 peptidase M23B.
 
     0.835
AEG16000.1
KEGG: mta:Moth_0311 hypothetical protein.
       0.794
AEG15999.1
KEGG: mta:Moth_0312 hypothetical protein.
       0.782
AEG15997.1
TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Cobyrinic acid a,c-diamide synthase; KEGG: adg:Adeg_0740 diguanylate cyclase; SMART: Diguanylate cyclase, predicted.
     
 0.709
AEG15950.1
KEGG: mta:Moth_0357 hypothetical protein.
 
     0.703
AEG15996.1
KEGG: dae:Dtox_0155 hypothetical protein.
 
     0.674
AEG14216.1
TIGRFAM: CRISPR-associated protein Cas5, Tneap type; CRISPR-associated protein Cas5; KEGG: mta:Moth_1730 hypothetical protein.
  
     0.653
AEG15158.1
KEGG: pth:PTH_2456 hypothetical protein.
 
     0.639
AEG15936.1
PFAM: TRAG protein; KEGG: dae:Dtox_1405 TraG family protein.
 
  
 0.636
AEG15942.1
Integrase family protein; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; KEGG: mta:Moth_0361 phage integrase.
  
   
 0.602
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.