STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG16017.1Helix-turn-helix domain protein; KEGG: chd:Calhy_0412 transcriptional regulator, xre family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3. (70 aa)    
Predicted Functional Partners:
AEG16018.1
Helix-turn-helix domain protein; KEGG: mta:Moth_0284 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
 
    
0.585
AEG14507.1
KEGG: tte:TTE2018 DNA primase.
  
    0.514
AEG16028.1
Helix-turn-helix domain protein; KEGG: mta:Moth_0281 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
 
     0.493
AEG16033.1
KEGG: helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
 
   
 0.486
AEG16943.1
Response regulator receiver protein; KEGG: pth:PTH_2840 FOG: CheY-like receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
    
 
 0.473
AEG16900.1
PFAM: Peptidase M23; KEGG: drm:Dred_3146 peptidase M23B.
  
     0.452
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.