STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG16194.1TIGRFAM: Ribosomal protein S20; HAMAP: Ribosomal protein S20; KEGG: chy:CHY_0406 30S ribosomal protein S20; PFAM: Ribosomal protein S20. (89 aa)    
Predicted Functional Partners:
AEG14049.1
TIGRFAM: Ribosomal protein L21; HAMAP: Ribosomal protein L21; KEGG: drm:Dred_2535 ribosomal protein L21; PFAM: Ribosomal protein L21.
  
 
 0.996
AEG14832.1
TIGRFAM: Ribosomal protein L28; HAMAP: Ribosomal protein L28; KEGG: dae:Dtox_1163 50S ribosomal protein L28; PFAM: Ribosomal protein L28.
  
 
 0.996
AEG15836.1
TIGRFAM: Ribosomal protein L32p; HAMAP: Ribosomal protein L32p; KEGG: dau:Daud_0637 50S ribosomal protein L32; PFAM: Ribosomal protein L32p.
   
 
 0.996
AEG16519.1
KEGG: pth:PTH_0356 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; PFAM: Ribosomal protein L13.
  
 
 0.996
AEG16061.1
KEGG: pth:PTH_1274 ribosomal protein S15P/S13E; TIGRFAM: Ribosomal protein S15, bacterial-type; PFAM: Ribosomal protein S15.
  
 
 0.992
rpsU
TIGRFAM: Ribosomal protein S21; HAMAP: Ribosomal protein S21; KEGG: dau:Daud_2051 ribosomal protein S21; PFAM: Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
  
 
 0.992
rpmA
TIGRFAM: Ribosomal protein L27; HAMAP: Ribosomal protein L27; KEGG: pth:PTH_0831 50S ribosomal protein L27; PFAM: Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
  
 
 0.991
AEG15688.1
TIGRFAM: Ribosomal protein S16; HAMAP: Ribosomal protein S16; KEGG: drm:Dred_2055 ribosomal protein S16; PFAM: Ribosomal protein S16.
  
 
 0.991
AEG16933.1
TIGRFAM: Ribosomal protein L31; HAMAP: 50S ribosomal protein L31; KEGG: chy:CHY_2565 50S ribosomal protein L31; PFAM: Ribosomal protein L31.
  
 
 0.991
AEG17048.1
PFAM: Ribosomal protein L34; manually curated; TIGRFAM: Ribosomal protein L34; KEGG: drm:Dred_3329 50S ribosomal protein L34; HAMAP: 50S ribosomal protein L34.
  
 
 0.991
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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