STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG16220.1PFAM: Type II secretion system protein E; KEGG: drm:Dred_2116 type II secretion system protein E. (459 aa)    
Predicted Functional Partners:
AEG16221.1
KEGG: pth:PTH_1450 response regulator; PFAM: Signal transduction response regulator, receiver region; Cobyrinic acid a,c-diamide synthase; SMART: Signal transduction response regulator, receiver region.
  
 0.980
AEG16218.1
PFAM: Type II secretion system F domain; KEGG: drm:Dred_2118 type II secretion system protein.
 
  
 0.971
AEG16219.1
PFAM: Type II secretion system F domain; KEGG: pth:PTH_1452 flp pilus assembly protein TadC.
 
  
 0.971
AEG16222.1
KEGG: pth:PTH_1449 flp pilus assembly protein CpaB; TIGRFAM: Pilus assembly, Flp-type CpaB; PFAM: SAF domain.
 
  
 0.954
AEG16224.1
TadE family protein; PFAM: TadE-like; KEGG: aar:Acear_0231 TadE family protein.
 
  
 0.933
AEG16223.1
PFAM: Protein of unknown function DUF2134, membrane; KEGG: pth:PTH_1448 flp pilus assembly protein TadD.
 
  
 0.927
AEG16217.1
PFAM: Protein of unknown function DUF192; KEGG: pth:PTH_1454 hypothetical protein.
 
     0.926
AEG16225.1
PFAM: Peptidase A24A, prepilin type IV; KEGG: drm:Dred_2111 peptidase A24A, prepilin type IV.
 
   
 0.905
AEG16226.1
PFAM: Flp/Fap pilin component; KEGG: pth:PTH_1445 flp pilus assembly protein, pilin Flp.
  
  
 0.700
AEG16216.1
Putative sensor with HAMP domain; KEGG: pth:PTH_1455 methyl-accepting chemotaxis protein; PFAM: HAMP linker domain; SMART: HAMP linker domain.
       0.684
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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