STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG16252.1KEGG: pth:PTH_0857 hydrolase; TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein. (831 aa)    
Predicted Functional Partners:
AEG14581.1
DNA protecting protein DprA; KEGG: pth:PTH_1245 Rossmann fold nucleotide-binding protein; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A.
 
  
 0.934
AEG16839.1
PFAM: Phosphoribosyltransferase; KEGG: pth:PTH_2756 amidophosphoribosyltransferases.
 
  
 0.908
AEG16195.1
KEGG: pth:PTH_0867 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta.
 
   
 0.867
AEG16255.1
TIGRFAM: Competence protein ComEA, helix-hairpin-helix region; PFAM: Soluble ligand binding domain; Helix-hairpin-helix motif; KEGG: pth:PTH_0854 hypothetical protein; SMART: Helix-hairpin-helix DNA-binding motif, class 1.
 
  
 0.857
AEG15541.1
PFAM: Type II secretion system F domain; KEGG: adg:Adeg_1723 type II secretion system F domain protein.
 
  
 0.844
AEG14257.1
TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG: dae:Dtox_2395 phenylalanyl-tRNA synthetase subunit beta.
 
   
 0.800
AEG15545.1
KEGG: dae:Dtox_3768 peptidase A24A domain protein; PFAM: Peptidase A24A, N-terminal; Peptidase A24A, prepilin type IV.
 
  
 0.794
AEG15543.1
General secretory pathway protein E; TIGRFAM: Type II secretion system gspE; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; KEGG: adg:Adeg_1725 general secretory pathway protein E; SMART: ATPase, AAA+ type, core.
  
  
 0.767
AEG15532.1
KEGG: dae:Dtox_2705 hypothetical protein.
 
  
 0.756
AEG15979.1
PFAM: Peptidase A24A, prepilin type IV; KEGG: mta:Moth_0333 peptidase A24A, prepilin type IV.
  
  
 0.754
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.