STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG16278.1KEGG: adg:Adeg_1894 cytochrome c-type biogenesis protein CcsB; TIGRFAM: Cytochrome c-type biogenesis protein CcsA; PFAM: Cytochrome c assembly protein. (271 aa)    
Predicted Functional Partners:
AEG16279.1
ResB family protein; PFAM: ResB-like; KEGG: adg:Adeg_1895 ResB protein required for cytochrome c biosynthesis-like protein.
  
 0.994
AEG15101.1
TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; KEGG: pth:PTH_0973 uroporphyrinogen-III methylase and uroporphyrinogen-III synthase; PFAM: Tetrapyrrole methylase; Tetrapyrrole biosynthesis, uroporphyrinogen III synthase.
  
    0.984
AEG16277.1
KEGG: adg:Adeg_1893 cytochrome c nitrate reductase, small subunit; TIGRFAM: Cytochrome c nitrate reductase, small subunit; PFAM: NapC/NirT cytochrome c, N-terminal.
 
  
 0.797
AEG16276.1
KEGG: adg:Adeg_1892 nitrite reductase (cytochrome; ammonia-forming); PFAM: Cytochrome c552.
 
  
 0.754
AEG16512.1
PFAM: Cytochrome c assembly protein, transmembrane region; KEGG: glo:Glov_2275 cytochrome c biogenesis protein transmembrane region.
  
  
 0.751
AEG16284.1
KEGG: sfu:Sfum_3598 redox-active disulfide protein 2.
  
  
 0.673
AEG15103.1
Glutamyl-tRNA reductase; TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; HAMAP: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; KEGG: pth:PTH_0971 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal.
 
  
 0.636
AEG13923.1
TIGRFAM: Redox-active disulphide protein 2; KEGG: pth:PTH_0650 hypothetical protein.
  
  
 0.607
AEG15095.1
Glutamate-1-semialdehyde 2,1-aminomutase; PFAM: Aminotransferase class-III; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; HAMAP: Glutamate-1-semialdehyde 2,1-aminomutase; KEGG: tjr:TherJR_1142 glutamate-1-semialdehyde-2,1-aminomutase.
 
  
 0.557
AEG16909.1
TIGRFAM: ATPase, F0 complex, subunit A; HAMAP: ATP synthase subunit a; KEGG: pth:PTH_2818 F0F1-type ATP synthase, subunit A; PFAM: ATPase, F0 complex, subunit A.
   
  
 0.532
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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