STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG16301.1KEGG: dae:Dtox_0892 rhodanese domain protein; PFAM: Copper amine oxidase-like, N-terminal; SMART: Rhodanese-like. (254 aa)    
Predicted Functional Partners:
AEG15668.1
PFAM: Manganese/iron superoxide dismutase, C-terminal; KEGG: drm:Dred_2101 manganese and iron superoxide dismutase.
   
 
 0.887
rplQ
TIGRFAM: Ribosomal protein L17; HAMAP: 50S ribosomal protein L17; KEGG: drm:Dred_0244 50S ribosomal protein L17; PFAM: Ribosomal protein L17.
  
   0.871
rpsQ
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
   0.869
AEG14049.1
TIGRFAM: Ribosomal protein L21; HAMAP: Ribosomal protein L21; KEGG: drm:Dred_2535 ribosomal protein L21; PFAM: Ribosomal protein L21.
  
   0.867
AEG16158.1
Metalloprotease ybeY; TIGRFAM: Uncharacterised protein family UPF0054; HAMAP: Uncharacterised protein family UPF0054; KEGG: pth:PTH_0892 putative metalloprotease; PFAM: Uncharacterised protein family UPF0054.
   
   0.866
rplK
Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
   
   0.830
AEG15992.1
PFAM: Copper amine oxidase-like, N-terminal; KEGG: pth:PTH_0168 hypothetical protein.
 
   
 0.779
AEG15807.1
PFAM: Copper amine oxidase-like, N-terminal; Tetratricopeptide TPR2; KEGG: bts:Btus_0241 copper amine oxidase domain protein.
  
  
 0.774
AEG14632.1
PFAM: Copper amine oxidase-like, N-terminal; Transglutaminase-like; KEGG: adg:Adeg_1339 copper amine oxidase domain protein.
  
     0.772
AEG15760.1
PFAM: Copper amine oxidase-like, N-terminal; KEGG: adg:Adeg_1643 copper amine oxidase domain protein.
  
     0.772
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.