STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG16353.1KEGG: pth:PTH_0654 regulatory protein; PFAM: Signal transduction histidine kinase, internal region; GAF; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; GAF. (443 aa)    
Predicted Functional Partners:
AEG16352.1
Two component transcriptional regulator, LytTR family; KEGG: pth:PTH_0655 response regulator; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region.
 0.997
AEG15788.1
Two component transcriptional regulator, LytTR family; KEGG: mta:Moth_1964 LytR/AlgR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region.
 0.990
AEG15787.1
KEGG: mta:Moth_1965 histidine kinase internal region; PFAM: Signal transduction histidine kinase, internal region; Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region; GAF; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; GAF.
  
  
 
0.909
AEG15592.1
Histidine kinase; KEGG: tye:THEYE_A0183 two component system histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; CHASE3; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region.
 
 
  
 0.908
AEG16310.1
KEGG: slp:Slip_0382 two component transcriptional regulator, LytTR family; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region.
 
 0.899
AEG16281.1
KEGG: dsy:DSY4082 hypothetical protein; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain.
 
    
 0.711
AEG15600.1
KEGG: mta:Moth_1477 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain.
 
    
 0.676
AEG14763.1
TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; PAS fold-4; KEGG: dae:Dtox_1078 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; PAS.
 
    
 0.526
AEG14785.1
KEGG: dae:Dtox_3084 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain.
 
    
 0.475
AEG16349.1
YjeF-related protein; KEGG: pth:PTH_0657 carbohydrate kinase; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; PFAM: YjeF-related protein, N-terminal; Uncharacterised protein family, carbohydrate kinase-related.
       0.463
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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