STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG16639.1TIGRFAM: Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; KEGG: bts:Btus_2423 dephospho-CoA kinase. (200 aa)    
Predicted Functional Partners:
AEG14206.1
PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; DNA glycosylase/AP lyase/isoleucyl tRNA synthetase, zinc finger domain; TIGRFAM: DNA glycosylase/AP lyase; HAMAP: Formamidopyrimidine-DNA glycosylase; KEGG: pth:PTH_1977 formamidopyrimidine-DNA glycosylase.
 
  
 0.984
AEG14837.1
Phosphopantetheine adenylyltransferase; PFAM: Cytidylyltransferase; TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; HAMAP: Coenzyme A biosynthesis protein; KEGG: dae:Dtox_1168 pantetheine-phosphate adenylyltransferase.
    
 0.941
AEG16350.1
TIGRFAM: Holo-[acyl carrier protein] synthase; Phosphopantethiene-protein transferase; HAMAP: Holo-[acyl-carrier-protein] synthase; KEGG: pth:PTH_0656 phosphopantetheinyl transferase; PFAM: 4'-phosphopantetheinyl transferase.
    
 0.912
AEG14207.1
TIGRFAM: DNA polymerase 1; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: pth:PTH_1976 DNA polymerase I; SMART: 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; 3'-5' exonuclease; DNA-directed DNA polymerase, family A, palm domain.
 
  
 0.911
AEG16423.1
PFAM: Protein of unknown function DUF169; KEGG: afw:Anae109_4088 hypothetical protein.
 
      0.893
AEG14194.1
PFAM: Lytic transglycosylase-like, catalytic; KEGG: drm:Dred_1595 lytic transglycosylase, catalytic.
 
    0.826
AEG15101.1
TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; KEGG: pth:PTH_0973 uroporphyrinogen-III methylase and uroporphyrinogen-III synthase; PFAM: Tetrapyrrole methylase; Tetrapyrrole biosynthesis, uroporphyrinogen III synthase.
  
  
 0.750
AEG14205.1
Sporulation protein YtaF; KEGG: drm:Dred_1597 hypothetical protein; TIGRFAM: Sporulation protein YtaF; PFAM: Protein of unknown function DUF204.
  
    0.731
AEG14827.1
TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; KEGG: pth:PTH_1761 pyrimidine reductase and pyrimidine deaminase; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding.
     
 0.690
AEG16638.1
TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; KEGG: drm:Dred_0191 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain.
     
 0.682
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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