Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEG16696.1Hypothetical protein. (272 aa)    
Predicted Functional Partners:
AEG16695.1
PFAM: Protein of unknown function DUF1156; DNA methylase N-4/N-6; KEGG: tra:Trad_2714 hypothetical protein.
       0.773
AEG16697.1
KEGG: ttj:TTHA1020 hypothetical protein; PFAM: DNA/RNA helicase, C-terminal; Helix-turn-helix type 3; SNF2-related; SMART: DNA/RNA helicase, C-terminal; DEAD-like helicase, N-terminal; Helix-turn-helix type 3.
       0.773
AEG16698.1
Diguanylate cyclase and metal dependent phosphohydrolase; TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: CHASE4; HAMP linker domain; PAS fold-3; PAS fold-4; Diguanylate cyclase, predicted; Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: drm:Dred_1552 diguanylate cyclase with PAS/PAC sensor; SMART: Diguanylate cyclase, predicted; PAS; Metal-dependent phosphohydrolase, HD region.
       0.566
AEG16694.1
KEGG: tra:Trad_2717 hypothetical protein.
       0.497
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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