STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG16713.1PFAM: Protein of unknown function DUF1648; KEGG: pth:PTH_1499 integral membrane protein. (227 aa)    
Predicted Functional Partners:
AEG16714.1
KEGG: adg:Adeg_1989 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
 
  
 0.981
AEG15668.1
PFAM: Manganese/iron superoxide dismutase, C-terminal; KEGG: drm:Dred_2101 manganese and iron superoxide dismutase.
  
    0.585
AEG15818.1
Regulatory protein ArsR; KEGG: pth:PTH_1733 transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
  
  
 0.509
AEG14126.1
Regulatory protein ArsR; Manually curated; PFAM: HTH transcriptional regulator, ArsR; KEGG: mta:Moth_2202 ArsR family transcriptional regulator; SMART: HTH transcriptional regulator, ArsR.
 
  
 0.428
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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