STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG16742.1TRAP transporter, 4TM/12TM fusion protein; KEGG: ddf:DEFDS_1399 TRAP-type transporter permease component; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit. (655 aa)    
Predicted Functional Partners:
AEG16743.1
TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: afu:AF0635 immunogenic protein (bcsp31-2).
    0.924
AEG16609.1
TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: apo:Arcpr_1316 TRAP transporter solute receptor, TAXI family.
    0.876
AEG16126.1
TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: opr:Ocepr_0708 trap transporter solute receptor, taxi family.
    0.874
AEG13955.1
TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: tai:Taci_1467 TRAP transporter solute receptor, TAXI family.
 
    0.845
AEG16741.1
Citrate transporter; PFAM: Divalent ion symporter; KEGG: pth:PTH_0452 Na+/H+ antiporter NhaD and related arsenite permeases.
       0.574
AEG16125.1
PFAM: Protein of unknown function DUF1850; KEGG: nph:NP0542A TRAP-type transport system protein.
 
    0.563
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.