STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG16743.1TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: afu:AF0635 immunogenic protein (bcsp31-2). (344 aa)    
Predicted Functional Partners:
AEG16742.1
TRAP transporter, 4TM/12TM fusion protein; KEGG: ddf:DEFDS_1399 TRAP-type transporter permease component; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
    0.924
AEG13958.1
KEGG: aoe:Clos_0678 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
    0.845
AEG16124.1
KEGG: aco:Amico_0962 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
    0.845
AEG16608.1
KEGG: amt:Amet_4705 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
    0.845
AEG16125.1
PFAM: Protein of unknown function DUF1850; KEGG: nph:NP0542A TRAP-type transport system protein.
 
    0.626
AEG16744.1
PFAM: D-galactarate dehydratase/Altronate hydrolase, C-terminal; KEGG: altronate dehydratase.
       0.513
AEG16741.1
Citrate transporter; PFAM: Divalent ion symporter; KEGG: pth:PTH_0452 Na+/H+ antiporter NhaD and related arsenite permeases.
       0.409
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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