STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG16763.1PFAM: Major facilitator superfamily MFS-1; KEGG: dau:Daud_1564 major facilitator transporter. (434 aa)    
Predicted Functional Partners:
AEG16764.1
PFAM: Amidohydrolase 1; KEGG: tjr:TherJR_1047 amidohydrolase.
       0.544
AEG15881.1
KEGG: dae:Dtox_0905 prephenate dehydratase; PFAM: Prephenate dehydratase; Amino acid-binding ACT; Chorismate mutase, type II.
   
 
 0.474
AEG16765.1
PFAM: Protein of unknown function, CGGC domain; KEGG: dae:Dtox_3196 hypothetical protein.
       0.457
AEG14390.1
PFAM: DNA N-6-adenine-methyltransferase; KEGG: mms:mma_2215 phage N-6-adenine methyltransferase.
  
     0.456
AEG13666.1
KEGG: dau:Daud_1910 hypothetical protein.
  
     0.420
AEG16730.1
KEGG: dau:Daud_1910 hypothetical protein.
  
     0.419
AEG16295.1
KEGG: dau:Daud_1910 hypothetical protein.
  
     0.415
AEG16683.1
PFAM: Deoxyribonuclease, TatD-related; KEGG: adg:Adeg_1220 TatD-related deoxyribonuclease.
  
     0.408
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.