STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG16921.1KEGG: drm:Dred_3165 hypothetical protein; HAMAP: UPF0059 membrane protein yebN; PFAM: Protein of unknown function DUF204. (177 aa)    
Predicted Functional Partners:
AEG16920.1
KEGG: drm:Dred_3164 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight.
       0.788
AEG16922.1
Sua5/YciO/YrdC/YwlC family protein; KEGG: pth:PTH_2828 putative translation factor; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal; SUA5.
  
    0.743
AEG14205.1
Sporulation protein YtaF; KEGG: drm:Dred_1597 hypothetical protein; TIGRFAM: Sporulation protein YtaF; PFAM: Protein of unknown function DUF204.
  
     0.621
AEG16919.1
Sugar-phosphate isomerase, RpiB/LacA/LacB family; TIGRFAM: Ribose/galactose isomerase; Ribose 5-phosphate isomerase B; KEGG: pth:PTH_2825 ribose 5-phosphate isomerase RpiB; PFAM: Ribose/galactose isomerase.
     
 0.594
AEG16918.1
KEGG: pth:PTH_2824 serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase.
       0.544
AEG15584.1
KEGG: pth:PTH_1057 hypothetical protein.
  
     0.513
AEG14207.1
TIGRFAM: DNA polymerase 1; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: pth:PTH_1976 DNA polymerase I; SMART: 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; 3'-5' exonuclease; DNA-directed DNA polymerase, family A, palm domain.
  
    0.473
AEG13853.1
SMART: Protein phosphatase 2C-related; TIGRFAM: Sporulation stage II, protein E; KEGG: pth:PTH_0191 hypothetical protein; PFAM: Sporulation stage II, protein E C-terminal.
  
     0.469
AEG16053.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: dae:Dtox_3168 dipicolinate synthase subunit A.
  
     0.442
AEG16639.1
TIGRFAM: Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; KEGG: bts:Btus_2423 dephospho-CoA kinase.
  
    0.406
Your Current Organism:
Desulfofundulus kuznetsovii
NCBI taxonomy Id: 760568
Other names: D. kuznetsovii DSM 6115, Desulfofundulus kuznetsovii DSM 6115, Desulfotomaculum kuznetsovii 17, Desulfotomaculum kuznetsovii DSM 6115
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