STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA1036Conserved hypothetical protein,predicted Tripartite ATP-independent periplasmic transporters, DctQ component. (202 aa)    
Predicted Functional Partners:
ebA1037
Putative membrane protein.
 
  
 0.965
dctQ
C4-dicarboxylate transport system,permease small subunit.
   
 
  0.905
ebA733
Hypothetical protein.
     
  0.900
ebB188
Conserved hypothetical protein.
   
 
  0.900
ebA1033
Putative exported solute binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
  
 0.892
ebA1032
Putative exported solute binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
  
 0.855
gpmB
Phosphoglycerate mutase 2; Belongs to the phosphoglycerate mutase family.
       0.785
glyA
Serine hydroxymethyltransferase 1; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
       0.503
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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