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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA1050Carboxy-terminal processing protease; Belongs to the peptidase S41A family. (461 aa)    
Predicted Functional Partners:
ebA1051
Peptidase family M23 protein.
 
  
 0.884
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
  
  
 0.768
ebA1048
Hypothetical protein.
       0.751
thiF
Adenylyltransferase.
  
    0.674
ebA2288
Hypothetical protein.
  
   0.549
ebA4929
Hypothetical protein.
  
   0.549
ebA6152
Conserved hypothetical protein.
  
   0.549
ebA651
Hypothetical protein.
  
   0.549
ebA6574
Conserved hypothetical protein.
  
   0.549
mcrA
Penicillin-binding 1 (peptidoglycan synthetase) transmembrane protein.
 
     0.506
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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