STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA1065Conserved hypothetical protein,predicted phosphoribosyltransferase family. (236 aa)    
Predicted Functional Partners:
rec2
DNA internalization-related competence protein ComEC/Rec2.
 
  
 0.924
smf
SMF protein, Rossmann fold nucleotide-binding protein involved in DNA uptake.
 
 
 0.913
ebA3157
Probable Mg(2+) chelatase family related protein.
 
  
 0.835
cspR
RNA methyltransferase CspR (SpoU class); Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.
       0.796
tyrA
Prephenate dehydrogenase.
   
  
 0.737
ebA1593
Putative ABC-2 transporter hydrophilic component.
   
    0.692
radC
DNA repair protein, radC; Belongs to the UPF0758 family.
 
    0.676
ebA2514
DNA repair protein similar to radC-family; Belongs to the UPF0758 family.
 
    0.656
ebA2402
DNA repair protein similar to radC-family; Belongs to the UPF0758 family.
 
    0.655
ebA527
DNA repair protein similar to radC family.
 
    0.639
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.