STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA1117Conserved hypothetical protein. (320 aa)    
Predicted Functional Partners:
ebB34
Conserved hypothetical protein.
 
     0.942
ebA1115
Hypothetical protein.
       0.727
ebA1121
Outer membrane lipoprotein containing OmpA/MotB domain.
     
 0.620
ebA1112
Conserved hypothetical protein,predicted glycosyl transferase family 2.
       0.585
ebA1114
Conserved hypothetical protein.
       0.578
ebA1682
Putative metal-dependent phosphohydrolase, possibly cGMP-dependent 3',5'-cyclic phosphodiesterase (EC 3.1.4.17).
  
 
 0.503
ebA2125
Hypothetical protein.
  
     0.479
ebA1124
Conserved hypothetical membrane protein.
       0.471
ebA6186
Hypothetical protein.
  
     0.468
ebA3362
Hypothetical protein.
  
  
 0.467
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.