Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dadAD-amino acid dehydrogenase small subunit. (421 aa)    
Predicted Functional Partners:
ebA3046
Aminotransferases class-IV.
     
 0.905
hisC
Histidinol-phosphate aminotransferase 1; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
   
 
 0.903
tyrB
Aromatic-amino-acid transaminase.
     
 0.903
pat
Aromatic-amino-acid aminotransferase.
     
 0.903
gcvT
Aminomethyltransferase of Glycine cleavage system; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.746
thiG
Thiamine biosynthesis protein, gene: THIG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
  
 0.570
dadX
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 0.529
gls1
Ferredoxin-dependent glutamate synthase.
  
  
 0.517
ebA6365
Predicted serine-pyruvate aminotransferase.
  
 
 0.512
fbp
Fructose-1,6-bisphosphatase.
  
  
 0.497
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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