Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
nirDAssimilatory nitrite reductase, small subunit. (114 aa)    
Predicted Functional Partners:
nirB
Assimilatory nitrite reductase, large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 
 0.998
narK
Nitrate transporter.
 
 
 0.984
narA
Assimilatory nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.983
narI
Nitrate reductase, gamma subunit.
  
 
 0.964
narH
Nitrate reductase, beta subunit.
  
 
 0.961
narG
Nitrate reductase, alpha chain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.951
narK1
Nitrate/proton symporter.
 
 
 0.936
narK2
Nitrate/nitrite antiporter.
  
 
 0.927
glnA
Glutamine synthetase protein.
   
 
 0.917
gdhA
Glutamate/leucine/phenylalanine/valine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.910
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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