STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA1245Hypothetical protein. (170 aa)    
Predicted Functional Partners:
ebA1241
General secretion pathway gspG related transmembrane protein.
 
     0.951
ebA1239
General (Type II) secretion pathway (GSP) D protein.
 
   
 0.949
ebB36
Probable secretion protein.
 
     0.947
ebA1234
Hypothetical protein.
 
  
 0.901
ebA1237
Hypothetical protein.
 
     0.898
ebA1229
Hypothetical protein.
 
     0.893
ebD34
Hypothetical protein.
 
     0.885
ebA1226
Putative type II secretion system protein.
 
 
 0.808
pulF
Bacterial type II secretion system protein.
 
  
 0.802
ebA1223
Putative bacterial general secretion pathway protein G related protein.
 
     0.588
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.