STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA1318Conserved hypothetical protein. (193 aa)    
Predicted Functional Partners:
lptA
OstA-like family protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane.
 
 
 0.992
ebA3394
Putative ATP-binding ABC transporter protein.
  
 
 0.951
ebA1316
Conserved hypothetical protein,predicted phosphatase.
  
  
 0.888
ebA7173
Conserved hypothetical protein.
 
 
 0.888
ebA7171
Conserved hypothetical protein.
 
 
 0.886
ebA1315
Conserved hypothetical protein,KpsF/GutQ family.
  
  
 0.884
kefB
Glutathione-regulated potassium-efflux system protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
       0.704
nlpB
Predicted uncharacterized lipoprotein.
  
     0.682
ech
Putative enoyl-CoA hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.635
ebA3974
Putative transmembrane protein.
  
     0.630
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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