STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lptAOstA-like family protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. (190 aa)    
Predicted Functional Partners:
ebA1318
Conserved hypothetical protein.
 
 
 0.992
ebA3394
Putative ATP-binding ABC transporter protein.
  
  
 0.859
ebA1315
Conserved hypothetical protein,KpsF/GutQ family.
  
  
 0.838
ostA
Organic solvent tolerance transmembrane protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Belongs to the LptD family.
 
 
 0.829
ebA1316
Conserved hypothetical protein,predicted phosphatase.
  
  
 0.826
kefB
Glutathione-regulated potassium-efflux system protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
       0.702
ech
Putative enoyl-CoA hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.653
bamA
Probable outer membrane protein/surface antigen; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
  
 0.612
dsbA
Thiol:disulfide interchange protein dsbA precursor.
 
     0.597
ebA5452
Predicted metal-binding, possibly nucleic acid-binding protein.
  
     0.581
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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