STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ebA1328Putative phosphatase protein. (177 aa)    
Predicted Functional Partners:
ebB144
Probable cytidylyltransferase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.
  
 0.991
rfaE
Similar to ADP-heptose synthase RFAE.
 
  
 0.978
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.
  
 0.968
ebA6910
HAD-superfamily hydrolase.
  
  
 
0.918
nlaB
Phospholipid and glycerol acyltransferase.
  
  
 0.818
glyS
glycyl-tRNA synthetase beta chain.
       0.771
glyQ
glycyl-tRNA synthetase alpha chain.
       0.771
ebA6912
ADP-heptose--LPS heptosyltransferase II.
   
 0.768
rfaF
ADP-heptose-LPS heptosyltransferase II.
   
 0.749
ebA7020
Predicted glycosyl transferase probable ADP-heptose:LPS heptosyltransferase.
 
   
 0.702
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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