STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
int-2Similar to phage-related integrase; Belongs to the 'phage' integrase family. (411 aa)    
Predicted Functional Partners:
intF
Phage-related integrase, fragmentary gene.
 
   
 0.568
ebA1369
Putative transcription regulator protein, lysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.526
int-3
Phage-related integrase; Belongs to the 'phage' integrase family.
 
   
0.493
ebA1363
Hypothetical protein.
       0.461
ebA1364
Hypothetical protein.
       0.461
ebA1365
Hypothetical protein.
       0.461
traW
Similar to plasmid-like transfer protein traW.
  
    0.443
int-8
Phage-related integrase; Belongs to the 'phage' integrase family.
  
     0.430
ebA1065
Conserved hypothetical protein,predicted phosphoribosyltransferase family.
   
    0.428
traF
Similar to plasmid-like sex pilus assembly protein TraF.
 
     0.421
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.