STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lysRTranscriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (301 aa)    
Predicted Functional Partners:
nagI
Gentisate 1,2-dioxygenase.
 
     0.657
s5h
Putative salicylate 5-hydroxylase.
 
   
 0.598
ebA5056
Putative transcriptional regulator,lysR family; Belongs to the LysR transcriptional regulatory family.
  
   
 0.593
ebA1370
Transcription elongation factor.
       0.556
reg3
Regulatory protein, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
   
 0.474
nagK
Fumarylpyruvate hydrolase.
  
    0.470
ebA2995
Transcriptional regulator, lysR family; Belongs to the LysR transcriptional regulatory family.
  
   
 0.455
ebA4032
Transcription regulator protein, lysR family; Belongs to the LysR transcriptional regulatory family.
  
   
 0.450
ebA5610
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
   
 0.444
ebA6101
Conserved hypothetical protein.
  
  
 0.444
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.