Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
lysRTranscriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (301 aa)    
Predicted Functional Partners:
nagI
Gentisate 1,2-dioxygenase.
 
     0.656
s5h
Putative salicylate 5-hydroxylase.
 
   
 0.600
ebA5056
Putative transcriptional regulator,lysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.590
ebA1370
Transcription elongation factor.
       0.556
reg3
Regulatory protein, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.470
nagK
Fumarylpyruvate hydrolase.
       0.470
gls1
Ferredoxin-dependent glutamate synthase.
     
 0.457
ebA2995
Transcriptional regulator, lysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.450
ebA6101
Conserved hypothetical protein.
  
    0.450
ebA4032
Transcription regulator protein, lysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.445
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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