Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| boxB | boxR | ebA2765 | ebA2762 | Benzoyl-CoA oxygenase component B. | Putative regulator of aerobic benzoate metabolic operon containing shikimate kinase-like domain; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.893 |
| boxB | bzdR | ebA2765 | ebA5278 | Benzoyl-CoA oxygenase component B. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.792 |
| boxB | ebA2758 | ebA2765 | ebA2758 | Benzoyl-CoA oxygenase component B. | Conserved hypothetical protein. | 0.825 |
| boxB | nagI | ebA2765 | ebA1373 | Benzoyl-CoA oxygenase component B. | Gentisate 1,2-dioxygenase. | 0.611 |
| boxB | nagI-2 | ebA2765 | ebA5613 | Benzoyl-CoA oxygenase component B. | Putative gentisate 1,2-dioxygenase oxidoreductase protein. | 0.482 |
| boxR | boxB | ebA2762 | ebA2765 | Putative regulator of aerobic benzoate metabolic operon containing shikimate kinase-like domain; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | Benzoyl-CoA oxygenase component B. | 0.893 |
| boxR | ebA2758 | ebA2762 | ebA2758 | Putative regulator of aerobic benzoate metabolic operon containing shikimate kinase-like domain; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | Conserved hypothetical protein. | 0.826 |
| boxR | nagI | ebA2762 | ebA1373 | Putative regulator of aerobic benzoate metabolic operon containing shikimate kinase-like domain; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | Gentisate 1,2-dioxygenase. | 0.618 |
| boxR | nagI-2 | ebA2762 | ebA5613 | Putative regulator of aerobic benzoate metabolic operon containing shikimate kinase-like domain; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | Putative gentisate 1,2-dioxygenase oxidoreductase protein. | 0.513 |
| boxR | s5h | ebA2762 | ebA1378 | Putative regulator of aerobic benzoate metabolic operon containing shikimate kinase-like domain; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | Putative salicylate 5-hydroxylase. | 0.406 |
| bzdR | boxB | ebA5278 | ebA2765 | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | Benzoyl-CoA oxygenase component B. | 0.792 |
| bzdR | ebA2758 | ebA5278 | ebA2758 | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | Conserved hypothetical protein. | 0.779 |
| bzdR | nagI | ebA5278 | ebA1373 | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | Gentisate 1,2-dioxygenase. | 0.635 |
| bzdR | nagI-2 | ebA5278 | ebA5613 | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | Putative gentisate 1,2-dioxygenase oxidoreductase protein. | 0.538 |
| ebA2758 | boxB | ebA2758 | ebA2765 | Conserved hypothetical protein. | Benzoyl-CoA oxygenase component B. | 0.825 |
| ebA2758 | boxR | ebA2758 | ebA2762 | Conserved hypothetical protein. | Putative regulator of aerobic benzoate metabolic operon containing shikimate kinase-like domain; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.826 |
| ebA2758 | bzdR | ebA2758 | ebA5278 | Conserved hypothetical protein. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.779 |
| ebA2758 | nagI | ebA2758 | ebA1373 | Conserved hypothetical protein. | Gentisate 1,2-dioxygenase. | 0.653 |
| ebA2758 | nagI-2 | ebA2758 | ebA5613 | Conserved hypothetical protein. | Putative gentisate 1,2-dioxygenase oxidoreductase protein. | 0.580 |
| ebA2758 | s5h | ebA2758 | ebA1378 | Conserved hypothetical protein. | Putative salicylate 5-hydroxylase. | 0.530 |
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