STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
s5hPutative salicylate 5-hydroxylase. (398 aa)    
Predicted Functional Partners:
nagI
Gentisate 1,2-dioxygenase.
 
  
 0.886
nagL
Maleylpyruvate isomerase.
 
   
 0.836
nagI-2
Putative gentisate 1,2-dioxygenase oxidoreductase protein.
 
  
 0.778
ebA127
Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein.
   
  
 0.648
nagK
Fumarylpyruvate hydrolase.
 
  
 0.627
lysR
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
   
 0.598
idi1
Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
  
  
 0.544
ebA2758
Conserved hypothetical protein.
  
     0.530
ebA2594
Hypothetical protein.
   
    0.514
ebA3186
Conserved hypothetical protein.
   
    0.514
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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