STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA1492Conserved hypothetical protein. (410 aa)    
Predicted Functional Partners:
ebD35
Hypothetical protein, potentially DNA-binding.
 
 
 0.978
ebA2491
Conserved hypothetical protein.
 
 
 
 0.818
ebB68
Conserved hypothetical protein.
   
 
 0.785
ebA1495
Hypothetical protein.
       0.773
ebA1504
Conserved hypothetical protein,predicted archaeal ATPase family.
 
     0.720
ebA1522
Conserved hypothetical protein.
 
     0.700
ebD107
Putative phage-like regulator protein.
 
 
 0.639
ebA1507
Hypothetical protein.
 
     0.596
bzdR
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
  
 
 0.585
ebA350
Hypothetical protein.
  
 
 0.582
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.