Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA1500Hypothetical protein. (396 aa)    
Predicted Functional Partners:
ebA35
UDP-glucose/GDP-mannose dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.544
wbpO
UDP-glucose/GDP-mannose dehydrogenase-like protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.544
ebA1496
Hypothetical protein.
       0.541
ebA5887
Probable NAD dependent epimerase/dehydratase, possibly involved in polysaccharide biosynthesis.
  
  
 0.520
ebA1504
Conserved hypothetical protein,predicted archaeal ATPase family.
       0.471
wbpI
UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.461
ebA5890
Predicted UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.461
ebD105
Fragment of putative epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.461
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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