STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA1535Glycosyl transferase. (609 aa)    
Predicted Functional Partners:
wcaJ
Colanic biosynthesis UDP-glucose lipid carrier transferase.
 
  
 0.867
ebA5887
Probable NAD dependent epimerase/dehydratase, possibly involved in polysaccharide biosynthesis.
  
 
 0.852
ebA1563
Hypothetical protein.
 
   
 0.799
ebA1522
Conserved hypothetical protein.
 
   
 0.780
ebA1527
Mannosyltransferase.
 
 
 0.765
ebA1504
Conserved hypothetical protein,predicted archaeal ATPase family.
  
     0.702
ebA1507
Hypothetical protein.
  
     0.683
ebA1652
Similar to tungsten-containing aldehyde ferredoxin oxidoreductase cofactor modifying protein.
 
     0.670
algD
GDP-mannose 6-dehydrogenase.
 
  
 0.651
algA
Putative mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.643
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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