STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA1565Glycosyl transferase. (611 aa)    
Predicted Functional Partners:
ebA1563
Hypothetical protein.
 
   
 0.952
wcaJ
Colanic biosynthesis UDP-glucose lipid carrier transferase.
 
  
 0.870
ebA5887
Probable NAD dependent epimerase/dehydratase, possibly involved in polysaccharide biosynthesis.
  
 
 0.852
ebA1527
Mannosyltransferase.
 
 
 0.766
ebA1522
Conserved hypothetical protein.
 
   
 0.725
algA
Putative mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.657
ebA1570
Conserved hypothetical protein,predicted acyltransferase 3 family family.
  
  
 0.646
algD
GDP-mannose 6-dehydrogenase.
 
  
 0.641
ebA1593
Putative ABC-2 transporter hydrophilic component.
 
 
 0.639
ebA1504
Conserved hypothetical protein,predicted archaeal ATPase family.
  
     0.628
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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