STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA1578Weakly similar to some putative glycosyltransferases. (680 aa)    
Predicted Functional Partners:
ebA1585
Probable glycosyl transferase.
 
  
 0.828
ebA1593
Putative ABC-2 transporter hydrophilic component.
 
 
 0.595
ebA1583
Hypothetical protein.
 
  
 0.579
ebA1575
Conserved hypothetical protein.
   
   0.572
ebA1592
Putative ABC transporter.
  
  
 0.514
ebA1610
Hypothetical protein, INTERPRO suggestion: probable Fimbrial assembly.
  
     0.499
ebA1598
Hypothetical protein.
 
     0.489
ebA6920
Putative maltooligosyltrehalose trehalohydrolase.
   
 0.458
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.458
gspJ
General secretion pathway protein J.
  
     0.440
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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