Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ebA1583Hypothetical protein. (407 aa)    
Predicted Functional Partners:
ebA1585
Probable glycosyl transferase.
  
  
 0.821
ebA1593
Putative ABC-2 transporter hydrophilic component.
 
   
 0.775
ebA1592
Putative ABC transporter.
 
   
 0.767
ebA1588
Hypothetical protein.
       0.701
ebA1594
Probable rotamase.
  
    0.683
ebA1578
Weakly similar to some putative glycosyltransferases.
 
  
 0.579
ebA4323
Hypothetical protein.
 
     0.528
ebA4458
Probable short chain dehydrogenase.
  
    0.516
ebA6908
Conserved hypothetical protein,predicted short-chain dehydrogenase/reductase SDR family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.516
metF
5,10-methylenetetrahydrofolate reductase oxidoreductase protein; Belongs to the methylenetetrahydrofolate reductase family.
  
    0.506
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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