STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA1592Putative ABC transporter. (273 aa)    
Predicted Functional Partners:
ebA1593
Putative ABC-2 transporter hydrophilic component.
 
 0.999
ebA1585
Probable glycosyl transferase.
 
  
 0.903
ebA1588
Hypothetical protein.
 
   
 0.839
ebA1594
Probable rotamase.
       0.777
ebA1583
Hypothetical protein.
 
     0.748
wza
Putative polysaccharide export protein.
  
  
 0.707
gumB
Polysaccharide export protein.
  
  
 0.707
ebA1174
Conserved hypothetical protein.
  
  
 0.704
ebA1565
Glycosyl transferase.
 
  
 0.581
algA
Putative mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.575
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.