STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA1593Putative ABC-2 transporter hydrophilic component. (483 aa)    
Predicted Functional Partners:
ebA1592
Putative ABC transporter.
 
 0.999
ebA1585
Probable glycosyl transferase.
 
  
 0.866
ebA1588
Hypothetical protein.
 
   
 0.837
ebA1594
Probable rotamase.
       0.777
wza
Putative polysaccharide export protein.
  
  
 0.758
gumB
Polysaccharide export protein.
  
  
 0.758
ebA1583
Hypothetical protein.
 
     0.757
ebA1174
Conserved hypothetical protein.
  
  
 0.709
ebA1065
Conserved hypothetical protein,predicted phosphoribosyltransferase family.
   
    0.692
ebA1565
Glycosyl transferase.
 
 
 0.639
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.