STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA1607Hypothetical protein. (238 aa)    
Predicted Functional Partners:
ebA1609
Hypothetical protein.
     
 0.826
gspD
General (Type II) secretion pathway (GSP) D protein.
     
 0.812
gspJ
General secretion pathway protein J.
     
 0.801
gspG
General secretion pathway protein G.
     
 0.797
ebA1610
Hypothetical protein, INTERPRO suggestion: probable Fimbrial assembly.
       0.796
gspH
General secretion protein H.
       0.796
gspK
General secretory pathway protein K.
     
 0.792
gspI
General secretion pathway protein I.
     
 0.791
gspE
General secretion pathway protein E (Type II traffic warden ATPase); Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
     
 0.536
gspF
General secretion pathway protein F.
     
 0.520
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.