STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA1610Hypothetical protein, INTERPRO suggestion: probable Fimbrial assembly. (341 aa)    
Predicted Functional Partners:
gspJ
General secretion pathway protein J.
 
  
 0.956
gspH
General secretion protein H.
 
   
 0.955
gspI
General secretion pathway protein I.
 
  
 0.953
gspD
General (Type II) secretion pathway (GSP) D protein.
 
  
 0.952
gspK
General secretory pathway protein K.
 
  
 0.951
gspL
General secretion pathway protein L.
     
 0.909
pilN
Type IV fimbrial biogenesis protein PilN.
  
 
 0.868
gspG
General secretion pathway protein G.
 
  
 0.867
ebA1609
Hypothetical protein.
     
 0.799
ebA1607
Hypothetical protein.
       0.796
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.