STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA1686Probable serine/threonine protein kinase. (687 aa)    
Predicted Functional Partners:
ebA1663
Phosphoprotein phosphatase.
 
 
 0.869
ebA1675
Hypothetical protein.
 
 
 
 0.846
c1A229
Phosphatase 2C domain.
 
 
 0.798
ebA1682
Putative metal-dependent phosphohydrolase, possibly cGMP-dependent 3',5'-cyclic phosphodiesterase (EC 3.1.4.17).
 
 
 
 0.702
ebA1688
Conserved hypothetical protein.
  
 0.669
ebA1673
Predicted gram-negative bacterial type I secretion protein.
 
    0.653
ebA1666
Probable fusion of ABC transporter-type transmembrane and ATP binding protein.
 
  
 0.627
ebA1670
Putative Rotamase (prolyl cis-trans isomerase).
 
    0.600
ebA1684
Hypothetical protein.
       0.578
ebA6699
Hypothetical protein.
 
 
 
 0.553
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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