STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA1698Hypothetical protein. (181 aa)    
Predicted Functional Partners:
fdh
Putative glutathione-dependent formaldehyde dehydrogenase.
 
    0.886
ebA4536
Hypothetical protein.
  
     0.603
ebA2903
Conserved hypothetical protein.
  
     0.554
phbZ-3
Poly(3-hydroxybutyrate) depolymerase.
  
     0.547
ebA154
Hypothetical protein, probable membrane protein subunit of cytochrome c oxidase.
  
     0.546
coxC-2
Subunit III of cytochrome c oxidase,also similar to C-terminal domain of long variants of subunit I.
  
     0.529
ctaC
Cytochrome c1, probably related to cytocrome c oxidase function.
  
     0.525
ebB244
Hypothetical protein.
 
     0.512
poxB
Pyruvate oxidase; Belongs to the TPP enzyme family.
 
    0.507
cycA
Di-heme cytochrome c (class I), probably related to cytochrome c oxidase function.
  
     0.506
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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