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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA1700Conserved hypothetical protein,ribonuclease BN falily. (317 aa)    
Predicted Functional Partners:
fdh
Putative glutathione-dependent formaldehyde dehydrogenase.
 
     0.607
btuE
Putative glutathione peroxidase protein; Belongs to the glutathione peroxidase family.
   
  
 0.525
ompC
Outer membrane protein (porin), similar to outer membrane porin protein 32 precursor (OMP32).
      
 0.517
ompC-2
Outer membrane protein (porin).
      
 0.517
ompC-3
Outer membrane protein (porin).
      
 0.517
ebA2146
Probable regulator protein containing CheR-and CheB-like domains.
 
     0.506
ebA1698
Hypothetical protein.
       0.453
cheB
Protein-glutamate methylesterase; Chemotaxis response regulator containing a CheY-like receiver domain and a protein-glutamate methylesterase.
  
     0.436
ebA6098
Probable Na+/H+ antiporter.
 
     0.434
ebA535
Conserved hypothetical protein,predicted Lipocalin-related protein and Bos/Can/Equ allergen family.
 
    0.410
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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