Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aroE | ebA1728 | ebA1735 | ebA1728 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Predicted esterase. | 0.587 |
| aroE | ebA1729 | ebA1735 | ebA1729 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Methyltransferase. | 0.541 |
| aroE | ebA1734 | ebA1735 | ebA1734 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Ribonuclease II. | 0.776 |
| aroE | ebA1737 | ebA1735 | ebA1737 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Putative TonB protein. | 0.813 |
| aroE | mgtE | ebA1735 | ebA1741 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Magnesium transporter; Acts as a magnesium transporter. | 0.661 |
| aroE | mtgA | ebA1735 | ebA1739 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Peptidoglycan glycosyltransferase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.837 |
| aroE | upk | ebA1735 | ebA1726 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Putative undecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.495 |
| bioB | ebA1729 | ebA1066 | ebA1729 | Biotin synthase protein (EC 2.8.1.6),gene: BIOB; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | Methyltransferase. | 0.471 |
| ebA1728 | aroE | ebA1728 | ebA1735 | Predicted esterase. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.587 |
| ebA1728 | ebA1729 | ebA1728 | ebA1729 | Predicted esterase. | Methyltransferase. | 0.774 |
| ebA1728 | ebA1734 | ebA1728 | ebA1734 | Predicted esterase. | Ribonuclease II. | 0.684 |
| ebA1728 | ebA1737 | ebA1728 | ebA1737 | Predicted esterase. | Putative TonB protein. | 0.647 |
| ebA1728 | mgtE | ebA1728 | ebA1741 | Predicted esterase. | Magnesium transporter; Acts as a magnesium transporter. | 0.456 |
| ebA1728 | mtgA | ebA1728 | ebA1739 | Predicted esterase. | Peptidoglycan glycosyltransferase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.565 |
| ebA1728 | upk | ebA1728 | ebA1726 | Predicted esterase. | Putative undecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.684 |
| ebA1729 | aroE | ebA1729 | ebA1735 | Methyltransferase. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.541 |
| ebA1729 | bioB | ebA1729 | ebA1066 | Methyltransferase. | Biotin synthase protein (EC 2.8.1.6),gene: BIOB; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.471 |
| ebA1729 | ebA1728 | ebA1729 | ebA1728 | Methyltransferase. | Predicted esterase. | 0.774 |
| ebA1729 | ebA1734 | ebA1729 | ebA1734 | Methyltransferase. | Ribonuclease II. | 0.527 |
| ebA1729 | ebA1737 | ebA1729 | ebA1737 | Methyltransferase. | Putative TonB protein. | 0.507 |
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