STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilITwitching motility protein PilI. (171 aa)    
Predicted Functional Partners:
pilL
Pili chemotaxis protein similar PilL.
 
 0.999
pilJ
Twitching motility transmembrane protein PilJ.
 
 0.998
pilG
Type IV pilus response regulator PilG.
 
 
 0.993
pilH
Type IV pilus response regulator PilH.
 
 
 0.991
ebA2146
Probable regulator protein containing CheR-and CheB-like domains.
  
 
 0.963
ebA6216
Probable membrane-associated methyl-accepting chemotaxis protein with HAMP domain.
 
 
 0.927
ebA6051
Putative sensory transduction histidine kinase of highly complex domain structure.
  
 
 0.883
ebA2985
Putative diguanylate cyclase/phosphodiesterase domain 2 (EAL).
  
 
 0.859
motA
Chemotaxis motA protein.
  
  
 0.845
ebA3436
Putative Sensory box histidine kinase/response regulator.
  
 
 0.833
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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