STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA1785Conserved hypothetical protein. (278 aa)    
Predicted Functional Partners:
ebA1787
Conserved hypothetical protein.
 
 
 0.945
ebA1783
Outer membrane protein, ortholog involved in agglutination in some bacteria.
 
   
 0.899
ebA1807
ABC transporter, ATP-binding/permease.
 
  
 0.824
ebA1805
HlyD family secretion protein.
 
  
 0.790
ebB52
Hypothetical protein.
 
     0.772
ebA1795
Hypothetical protein.
 
   
 0.714
aprE
Probable alkaline protease secretion protein.
 
  
 0.662
queF
Similar to queF gene product; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).
 
     0.465
ebA6328
Complex sensory protein with histidine kinase domain.
   
 
 0.419
ebA5582
Conserved hypothetical protein,predicted Rhodopsin-like GPCR superfamily.
 
 
 
 0.418
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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