STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ebA1787Conserved hypothetical protein. (648 aa)    
Predicted Functional Partners:
ebA1785
Conserved hypothetical protein.
 
 
 0.945
ebA6051
Putative sensory transduction histidine kinase of highly complex domain structure.
 
 
 0.939
ebA2985
Putative diguanylate cyclase/phosphodiesterase domain 2 (EAL).
 
 
0.919
ebA6058
Probable response regulator.
 
  
 0.906
ebA6328
Complex sensory protein with histidine kinase domain.
 
  
0.905
ebA1783
Outer membrane protein, ortholog involved in agglutination in some bacteria.
 
   
 0.874
ebA793
Response regulator receiver protein.
 
 
0.865
ebA6104
Sensory protein with histidine kinase domain.
 
 
 0.857
ebA3785
Phospholipase A2 family protein.
 
  
0.843
ebA5582
Conserved hypothetical protein,predicted Rhodopsin-like GPCR superfamily.
 
  
 0.833
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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