STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebA1795Hypothetical protein. (971 aa)    
Predicted Functional Partners:
ebA1807
ABC transporter, ATP-binding/permease.
 
  
 0.947
ebA1805
HlyD family secretion protein.
 
  
 0.839
ebA1783
Outer membrane protein, ortholog involved in agglutination in some bacteria.
 
  
 0.777
ebA1787
Conserved hypothetical protein.
 
  
 0.760
ebA7184
Hypothetical protein.
  
  
 0.758
ebA1785
Conserved hypothetical protein.
 
   
 0.710
ebB52
Hypothetical protein.
 
     0.682
ebA1803
Putative LuxR-family transcriptional regulator.
 
  
 0.595
ebA2473
Hypothetical gene.
    
 
 0.577
ebA6051
Putative sensory transduction histidine kinase of highly complex domain structure.
 
  
 0.577
Your Current Organism:
Aromatoleum aromaticum
NCBI taxonomy Id: 76114
Other names: A. aromaticum EbN1, Aromatoleum aromaticum EbN1, Aromatoleum aromaticum str. EbN1, Aromatoleum aromaticum strain EbN1, Azoarcus sp. EbN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.